protvista-structure

A native web component wrapper around Mol*

Usage

<!-- With UniProt Accession -->
<protvista-structure accession="P06493" structureId="4YC3" />
<!-- With a specific PDBe entry selected and the entry table being hidden -->
<protvista-structure
  accession="P06493"
  highlight="209:220"
  structureId="4YC3"
  hide-table
/>

API Reference

Properties

accession

A UniProt protein accession.

highlight

This is a comma separated list of numerical ranges represented as a string e.g. "1-5,10-20". When available, it will highlight all the residues corresponding to the given sequence positions.

structureId

The id of the structure to display for the provided accession.

height

The optional height of both table -- if visible, and the 3D structure. By default the value is set to 480px. This should be a string value, representing a valid CSS value for an element's height property.

uniprot-mapping-url

Optional custom URL for fetching the mapping from PDB to UniProt. The lowercase PDB ID is appended here.

alphafold-mapping-url

Optional custom URL for fetching the AlphaFold prediction metadata and mapping. The AlphaFold structure ID is appended here.

custom-download-url

Optional custom URL for downloading cif structure files. The lowercase PDB ID is appended to it, including .cif suffix.