npm package discovery and stats viewer.

Discover Tips

  • General search

    [free text search, go nuts!]

  • Package details

    pkg:[package-name]

  • User packages

    @[username]

Sponsor

Optimize Toolset

I’ve always been into building performant and accessible sites, but lately I’ve been taking it extremely seriously. So much so that I’ve been building a tool to help me optimize and monitor the sites that I build to make sure that I’m making an attempt to offer the best experience to those who visit them. If you’re into performant, accessible and SEO friendly sites, you might like it too! You can check it out at Optimize Toolset.

About

Hi, 👋, I’m Ryan Hefner  and I built this site for me, and you! The goal of this site was to provide an easy way for me to check the stats on my npm packages, both for prioritizing issues and updates, and to give me a little kick in the pants to keep up on stuff.

As I was building it, I realized that I was actually using the tool to build the tool, and figured I might as well put this out there and hopefully others will find it to be a fast and useful way to search and browse npm packages as I have.

If you’re interested in other things I’m working on, follow me on Twitter or check out the open source projects I’ve been publishing on GitHub.

I am also working on a Twitter bot for this site to tweet the most popular, newest, random packages from npm. Please follow that account now and it will start sending out packages soon–ish.

Open Software & Tools

This site wouldn’t be possible without the immense generosity and tireless efforts from the people who make contributions to the world and share their work via open source initiatives. Thank you 🙏

© 2024 – Pkg Stats / Ryan Hefner

snomed-ct-ancestry

v1.1.2

Published

A tool that generates ancestors lists for a given set of SNOMED CT conceptIds

Downloads

3

Vulnerabilities

Powered byPowered by Snyk
  • 0High
  • 0Medium
  • 0Low

Links

Git

Maintainers

alolopezalolopez

Keywords

Readme

snomed-ct-ancestry

Command line utility to generate ancestors lists for review activities

Install

npm install -g snomed-ct-ancestry

Use

Run from the command line:

ancestry -r [path-to-rf2-relationships-snapshot] -d [path-to-rf2-descriptions-snapshot] -i [path-to-input-file]

The input file should be a tab delimited file with 2 columns, ConceptId and Term. The second column (term) is optional.

Output

The tool generates the output as a tab delimited file, named "ancestorsForList.txt", that contains 4 columns:

  • ConceptId: for one of the concepts in the input list
  • FSN: for the same concept
  • Ancestor ConceptId: for one of the ancestors of the concept
  • Ancestor FSN: for the same ancestor

Example:

ConceptId	FSN	Ancestor ConceptId	Ancestor FSN
200001	Berberine (substance)	45695000	Plant alkaloid (substance)
200001	Berberine (substance)	301054007	Phytochemical (substance)
200001	Berberine (substance)	62873003	Plant agent (substance)
200001	Berberine (substance)	373285005	Naturally occurring alkaloid (substance)
200001	Berberine (substance)	312414008	Chemical categorized functionally (substance)
200001	Berberine (substance)	312412007	Substance categorized functionally (substance)
200001	Berberine (substance)	441900009	Chemical (substance)
200001	Berberine (substance)	105590001	Substance (substance)
200001	Berberine (substance)	138875005	SNOMED CT Concept (SNOMED RT+CTV3)
200001	Berberine (substance)	256248008	Plant material (substance)
200001	Berberine (substance)	289958009	Organic natural material (substance)
200001	Berberine (substance)	260786008	Natural material (substance)
200001	Berberine (substance)	115668003	Biological substance (substance)
200001	Berberine (substance)	260769002	Material (substance)
200001	Berberine (substance)	419001004	Alkaloid (substance)
200001	Berberine (substance)	116280007	Heterocyclic compound (substance)
200001	Berberine (substance)	41175001	Organic compound (substance)
200001	Berberine (substance)	312415009	Chemical categorized structurally (substance)