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primermap

v0.2.4

Published

loads a sequence:primer map

Downloads

14

Vulnerabilities

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Links

Git

Maintainers

dohallorandohalloran

Keywords

primeroligobiojs

Readme

primermap

NPM version

Loads a sequence:primer map

Getting Started

Into the text area enter the following data:

  1. Input the starting positions of each forward primer on a line that begins with FS
  2. Input the forward primer length on a line that begins with LF
  3. Input the starting positions of each reverse primer on a line that begins with RS
  4. Input the reverse primer length on a line that begins with LR
  5. Input the sequence name on a line that begins with >
  6. Input the sequence length on a line that begins with #

press submit and enjoy the primer::sequence map

Output

  • Scroll under the scaled sequence map to get a base pair position
  • Visualize the forward primers as blue arrows and the reverse primers as red arrows

Contributing

All contributions are welcome.

Support

If you have any problem or suggestion please open an issue here.

License

The MIT License

Copyright (c) 2015, dohalloran

Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the "Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions:

The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software.

THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.