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pdbe-molstar

v3.3.2

Published

Molstar implementation for PDBe

Downloads

1,321

Vulnerabilities

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Links

Git

Maintainers

mandarsdmandarsdpdbegrouppdbegroup

Keywords

Molstar3D viewerPDBebiojs

Readme

PDBe Molstar

Published on NPM

PDBe implementation of Mol* (/'mol-star/)

Refer PDBe Molstar Wiki for detailed documentation and examples

Building & Running locally

npm install
npm run build
# npm run rebuild  # for a clean build
npm run serve

Build automatically on file save:

npm run watch

Manual testing

  • Run locally by npm run serve
  • Go to http://127.0.0.1:1338/portfolio.html and check the viewer with various different setting (some of these reflect the actual setting on PDBe pages)
  • If you want to tweak the options, go to "Frame URL" and change the options in the URL

Deployment

  • Bump version in package.json using semantic versioning
    • Use a version number like "1.2.3-beta.1" for development versions (to be used in development environment wwwdev.ebi.ac.uk)
    • Use a version number like "1.2.3" for proper releases
  • Ensure npm install && npm run lint && npm run rebuild works locally
  • Update CHANGELOG.md
  • Git commit and push (commit message e.g. "Version 1.2.3")
  • Create a git tag matching the version with prepended "v" (e.g. "v1.2.3")
  • The GitHub repo will automatically be mirrored to EBI GitLab (might take up to 1 hour)
  • CICD pipeline in EBI GitLab will automatically publish the package to npm (https://www.npmjs.com/package/pdbe-molstar)
  • The files will become available via JSDeliver
    • Latest version including development versions:
      • https://cdn.jsdelivr.net/npm/pdbe-molstar@dev/build/pdbe-molstar-plugin.js
      • https://cdn.jsdelivr.net/npm/pdbe-molstar@dev/build/pdbe-molstar-component.js
      • https://cdn.jsdelivr.net/npm/pdbe-molstar@dev/build/pdbe-molstar.css
      • https://cdn.jsdelivr.net/npm/pdbe-molstar@dev/build/pdbe-molstar-light.css
    • Latest proper release:
      • https://cdn.jsdelivr.net/npm/pdbe-molstar@latest/build/pdbe-molstar-plugin.js
      • https://cdn.jsdelivr.net/npm/pdbe-molstar@latest/build/pdbe-molstar-component.js
      • https://cdn.jsdelivr.net/npm/pdbe-molstar@latest/build/pdbe-molstar.css
      • https://cdn.jsdelivr.net/npm/pdbe-molstar@latest/build/pdbe-molstar-light.css
  • Go to https://www.jsdelivr.com/tools/purge and purge the cache for abovementioned URLs (otherwise it might take up to 7 days to before @latest starts pointing to the new version)