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ome-zarr-metadata

v0.5.1

Published

A typescript library for interacting with OME-Zarr metadata

Downloads

130

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Links

Maintainers

clbarnesclbarnes

Keywords

Readme

ome-zarr-metadata

A typescript library for interacting with OME-Zarr metadata.

See zarrita for a typescript library for interacting with Zarr data which may implement the OME-Zarr specification.

Usage notes

In several places, this library distinguishes between the stored "raw" form of the metadata, as defined by the specification, and the "functional" form which is easier to work with in a valid way.

Broadly, interfaces with the suffix Raw describe the raw form, and classes describe the functional form. The classes implement static fromRaw and toRaw methods for deserialising from and serialising to the JSON.parse / JSON.stringify-able object forms.

Development

This library is developed using rslib.

Setup

Install the dependencies:

pnpm install

Get Started

Build the library:

pnpm build

Build the library in watch mode:

pnpm dev

Contributions

At present, this library contains implementations for

  • [ ] 0.5
    • [x] axes
    • [x] coordinateTransformations
    • [x] multiscales
    • [x] labels
    • [ ] plate
    • [ ] well
    • [ ] bioformats2raw.layout
    • [ ] omero
  • [ ] 0.4
  • [ ] 0.3
  • [ ] 0.2
  • [ ] 0.1

Contributions are welcome for other metadata items and versions.