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jbrowse-plugin-biothings

v1.1.1

Published

JBrowse 2 biothings API plugin

Downloads

102

Vulnerabilities

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Links

Maintainers

cmdcolincmdcolin

Keywords

jbrowsejbrowse2

Readme

jbrowse-plugin-biothings

Adapts to APIs like mygene.info to get super rich gene annotations

Demo

MyGene.info+MyVariant.info hg19

https://jbrowse.org/code/jb2/main/index.html?config=https%3A%2F%2Funpkg.com%2Fjbrowse-plugin-biothings%2Fdist%2Fconfig.json&session=share-NgDOuAfwWy&password=ZPZgJ

Using in JBrowse 2

Add to the "plugins" of your JBrowse Web config:

{
  "plugins": [
    {
      "name": "Biothings",
      "url": "https://unpkg.com/jbrowse-plugin-biothings/dist/jbrowse-plugin-biothings.umd.production.min.js"
    }
  ]
}

You can download that JS file and re-host it if you want to avoid a CDN

Modifying the codebase or using in @jbrowse/react-linear-genome-view

See DEVELOPERS.md

Screenshot