drptranslator
v2.8.0
Published
A DNA-RNA-Protein translator library
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Readme
NOTICE
- Since version 1.2.0 This library requires you to use node 6+
Hello everyone!
Welcome to DNA-RNA-Protein Translator or if you may drptranslator I have a very bad problem of naming but don't let that stop you!
DRPTranslator is a small library written in typescript, this is intended for a really low entry level of genetics, nothing really advanced since I'm not a genetist after all. However if you want this to help someone at school this can suit you well :)
At the moment these are some of the usages of the principal uses:
- Translate a DNA sequence into a RNA sequence
- Obtain the complementary DNA sequence from another DNA sequence
- Translate directly from DNA to an Aminoacid sequence
- Translate RNA to an Aminoacid sequence
- Find starts and stops codons in a sequence
and some other cool stuff like a obtaining a codon array or find the first and last start and stop sequence.
Install
how can you consume this library? this is intended to be used in a nodejs environment so you can install it as a dependency
npm install --save drptranslator
Usage
Tou can Test it Here Javascript
const { RNATranslator, DNATranslator } = require("drptranslator");
const rTranslator = new RNATranslator();
const dTranslator = new DNATranslator();
const rnaAaSeq = rTranslator.transRNAtoAA("AUGGUCUGC");
const dnaAaSeq = dTranslator.transDNAtoAA("ATGGTCTGC");
const rnatodna = rTranslator.transRNAtoDNA("CCGAUCGAUCGCGAUCGAUCUUGCUCA");
const arnAASeq = rTranslator.transRNAtoAA("CCGAUCGAUCGCGAUCGAUCUUGCUCA");
const dnaAASeq = dTranslator.transDNAtoAA("GGCTAGCTAGCGCTAGCTAGAACGAGT");
console.log(rnaAaSeq, dnaAaSeq, arnAASeq, rnatodna, dnaAASeq);
// "Met-Val-Cys"
// "Tyr-Gln-Thr"
// "Pro-Ile-Asp-Arg-Asp-Arg-Ser-Cys-Ser"
// "GGCTAGCTAGCGCTAGCTAGAACGAGT"
// "Pro-Ile-Asp-Arg-Asp-Arg-Ser-Cys-Ser"
Typescript
import { RNATranslator, DNATranslator } from "drptranslator";
const rTranslator = new RNATranslator();
const dTranslator = new DNATranslator();
const rnaAaSeq = rTranslator.transRNAtoAA("AUGGUCUGC");
const dnaAaSeq = dTranslator.transDNAtoAA("ATGGTCTGC");
const rnatodna = rTranslator.transRNAtoDNA("CCGAUCGAUCGCGAUCGAUCUUGCUCA");
const arnAASeq = rTranslator.transRNAtoAA("CCGAUCGAUCGCGAUCGAUCUUGCUCA");
const dnaAASeq = dTranslator.transDNAtoAA("GGCTAGCTAGCGCTAGCTAGAACGAGT");
console.log(rnaAaSeq, dnaAaSeq, arnAASeq, rnatodna, dnaAASeq);
// "Met-Val-Cys"
// "Tyr-Gln-Thr"
// "Pro-Ile-Asp-Arg-Asp-Arg-Ser-Cys-Ser"
// "GGCTAGCTAGCGCTAGCTAGAACGAGT"
// "Pro-Ile-Asp-Arg-Asp-Arg-Ser-Cys-Ser"
What's next?
- [x] Document source files
- [x] Creating a website for its API docs
- [ ] Publish a demo of an app using the library
- [ ] Adding more cappabilities
Suggestions
If you have an idea or you want to help to make this something bigger, raise an issue :) I'm glad to check out your ideas!