@sibyl229/gene-ontology-ribbon
v1.2.7
Published
A react component for generating heatmap type displays for ontology slims.
Downloads
3
Maintainers
Readme
ribbon
Short form matrix view of all GO annotations for a given gene
Acknowledgments
- Thanks to Sibyl Gao (@sibyl229) for knowing what to do and how to do it for AGR usage, Josh Goodman for making his code available as a start point, Seth Carbon (@kltm) for bearing with my naive questions, and Chris Mungall (@cmungall) for all the usual fantastic things he does
Installation
Make sure node.js is installed - see https://nodejs.org/en/download/
Once node.js is on your machine then dependent packages need to be brought in. Running
npm install
in the components's root directory will install everything you need for development.Note that you may need to run 'npm install' as sudo.
Demo Ribbon Server
npm start
will run a local server with the ribbon's demo app at http://localhost:3000 with hot module reloading.- To actually see a populated 'ribbon' you will need to provide the resource name and the resource's gene identifier in the URL. That is: http://localhost:3000/?subject=MGI:MGI:97490 or http://localhost:3000/?subject=ZFIN:ZDB-GENE-990415-173
Examples
fly
zebrafish
- mouse
Build the library
npm run build
will prepare the assets of the library for publishing to NPM.