chrom-region

Chromosomal region class used in GIVE, supporting some basic region operations.

• Install
• Usage
• Testing
• License
• Class API Documentation

Install

npm install @givengine/chrom-region

Usage

// Import class definition
const ChromRegion = require('@givengine/chrom-region')

// Instantiate a ChromRegion object
var newRegion = new ChromRegion('chr1:12345-67890')

// Operate on ChromRegions
newRegion.extend(1, true)
console.log(newRegion.toString())

Testing

npm test

License

Copyright 2017-2019 The Regents of the University of California. All Rights Reserved.

Created by Xiaoyi Cao, Department of Bioengineering

Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at

http://www.apache.org/licenses/LICENSE-2.0

Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License.

Class API Documentation

Please refer to https://github.com/Zhong-Lab-UCSD/chrom-region/blob/master/chromRegion.md